Protein ZmEREB195 | |
---|---|
Information | |
TF Name: | ZmEREB195 |
Species: | Maize |
TF Family: | AP2/ERF-AP2 |
Gene Name(Synonym): | ZmERFAP2_91 |
Uniprot ID: | A0A1D6PDQ1 |
ZmEREB195 is a protein in the AP2/ERF-AP2 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Overview of domains present in v5 transcripts | |
---|---|
PF00847 | |
Zm00001eb249290_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d017462 | DAPseq | sequence | fimo | position | |
Zm00001d017462 | DAPseq | sequence | fimo | position | |
Zm00001d017462 | ChIPseq | sequence | fimo | position | |
Zm00001d017462 | PChIPseq | sequence | fimo | position |
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00847 |
|
PF00847 |
|
Hover here to show all domains |
GAACCAAAATTTTCCAAATCAAGTG...
GAACCAAAATTTTCCAAATCAAGTGCTGAAATTCCCTCCGAACCACGACACCACGTGAGGGGCACCGGAGACCAACAAAGATGCTGCTTAACCCGGCGTGCGAGGCGGCAGCGCCGATGGACAGCATCCGGCATCACCTCCTGGACGAGCCGGCGGCGGCGGCGACCGCGAGCGCGGCTCCGCGGCCGGTGTACTGCCGCAGCACGAGCTTCGGCAGCCTAGTGGCGGACCAATGGAGCGAGTCGCTCCCGTTCCGCCCCGACGACGCCGACGACATGGTCGTCTTCGGCGCGCTCCGCGACGCCTTTTCCCAGGGCTGGCTCCCCGACGGCTCCTTCGCCGCCGTGAAGCCCGAGCCCCTGGCGTTCCCGGACTCCCCCTACGAGCGCGGATCCTATCCCTGCCTTGGTGGCTTCCTTCTCGCGGAGGGGCCTGAGACGCCGACCGAGGCGGCGACGACGCCCGGGAGCGAGGAGGAGGCCGCGGCGGCGGTGTCCAGGGGGAAGCACTACCGCGGGGTGAGGCAGCGGCCGTGGGGCAAGTTCGCGGCGGAGATCCGGGACCCGGCCAAGAACGGCGCGCGCGTGTGGCTGGGCACGTACGACAGCGCCGAGGACGCCGCCGTGGCCTACGACCGCGCCGCGTACCGCATGCGCGGCTCCCGCGCGCTCCTCAACTTCCCGCTCCGCATCGGCTCCGAGATCGCCGCGGCGGCCGCCGCCGTCGCGGCCACTGCCCCTGCCGCGGGAGACAAGCGGGCGTCCCCAGAGCCGACCGCGAGCTCCGACTCCTCCCCTTCGGCCTCCTCTGCGACACCGAAGCGGAGGAAGAGAGGCGAGGCCGCTGCCGCGACCATGGCCATGGCCCTTGTGCCGCCCCCGCCGGCGGCGCAGGCGCCCGTCCAGCTGACCCTCCCGGCCCGTCCGTGGTTCGCCGCCGGCCCCGTCCAGCAGCTAGTGAGCTAACTGATGGTGTACCAGTGGTTCGTGGTTCATGGATTCATCTCAGTGCAAGAACAGAGCAACAAGATGCGCATCAATTCAAACACAGGCACACGCGCGCGCGCGCGTGCGCTGGTCCAAGAAATGCGTGTGACGAGCTCGAGGGCATCGTCATCTGGATGTTCTCTGGTTCGCATGGAAACTGTTCCTCCATGGTCGCTAGTGTGGTGGCTTGTGAATTGTGATGTGTAGAACCAGAATGAATCGTGTTTGTGGCGTCATTGCATTGGATTCGGA
MLLNPACEAAAPMDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGW
LPDGSFAAVKPEPLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIR
DPAKNGARVWLGTYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPS
ASSATPKRRKRGEAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
AATCAATTTATAGTTGTGCTACTAG...
AATCAATTTATAGTTGTGCTACTAGAAACAAAGCCATACTATAGTTCTTCCATCCGTAGCTTCGAAAACGATCGAACCACGTGACAGTAACACCGGAAAATTCAAGGAAGGTCATCTAGAAGCGCGACGACAAATGGTGATGCAGCTCCACCTCTCCAGTCCCCGCTATATAAGCCTGGGCCGTGGCCAGCCTCCTTCCGAACCAAAATTTTCCAAATCAAGTGCTGAAATTCCCTCCGAACCACGACACCACGTGAGGGGCACCGGAGACCAACAAAGATGCTGCTTAACCCGGCGTGCGAGGCGGCAGCGCCGATGGACAGCATCCGGCATCACCTCCTGGACGAGCCGGCGGCGGCGGCGACCGCGAGCGCGGCTCCGCGGCCGGTGTACTGCCGCAGCACGAGCTTCGGCAGCCTAGTGGCGGACCAATGGAGCGAGTCGCTCCCGTTCCGCCCCGACGACGCCGACGACATGGTCGTCTTCGGCGCGCTCCGCGACGCCTTTTCCCAGGGCTGGCTCCCCGACGGCTCCTTCGCCGCCGTGAAGCCCGAGCCCCTGGCGTTCCCGGACTCCCCCTACGAGCGCGGATCCTATCCCTGCCTTGGTGGCTTCCTTCTCGCGGAGGGGCCTGAGACGCCGACCGAGGCGGCGACGACGCCCGGGAGCGAGGAGGAGGCCGCGGCGGCGGTGTCCAGGGGGAAGCACTACCGCGGGGTGAGGCAGCGGCCGTGGGGCAAGTTCGCGGCGGAGATCCGGGACCCGGCCAAGAACGGCGCGCGCGTGTGGCTGGGCACGTACGACAGCGCCGAGGACGCCGCCGTGGCCTACGACCGCGCCGCGTACCGCATGCGCGGCTCCCGCGCGCTCCTCAACTTCCCGCTCCGCATCGGCTCCGAGATCGCCGCGGCGGCCGCCGCCGTCGCGGCCACTGCCCCTGCCGCGGGAGACAAGCGGGCGTCCCCAGAGCCGACCGCGAGCTCCGACTCCTCCCCTTCGGCCTCCTCTGCGACACCGAAGCGGAGGAAGAGAGGCGAGGCCGCTGCCGCGACCATGGCCATGGCCCTTGTGCCGCCCCCGCCGGCGGCGCAGGCGCCCGTCCAGCTGACCCTCCCGGCCCGTCCGTGGTTCGCCGCCGGCCCCGTCCAGCAGCTAGTGAGCTAACTGATGGTGTACCAGTGGTTCGTGGTTCATGGATTCATCTCAGTGCAAGAACAGAGCAACAAGATGCGCATCAATTCAAACACAGGCACACGCGCGCGCGCGCGTGCGCTGGTCCAAGAAATGCGTGTGACGAGCTCGAGGGCATCGTCATCTGGATGTTCTCTGGTTCGCATGGAAACTGTTCCTCCATGGTCGCTAGTGTGGTGGCTTGTGAATTGTGATGTGTAGAACCAGAATGAATCGTGTTTGTGGCGTCATTGCATTGGATTCGGACGAGTTGAAATCGGAAGCTTCTCTGTCTGTGAGAGAGGCTGGTGCAAGTTTGCATCACCATGTCTCGAATGGATATTATTCTTTGTTCTTTGG
MDSIRHHLLDEPAAAATASAAPRPVYCRSTSFGSLVADQWSESLPFRPDDADDMVVFGALRDAFSQGWLPDGSFAAVKPE
PLAFPDSPYERGSYPCLGGFLLAEGPETPTEAATTPGSEEEAAAAVSRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLG
TYDSAEDAAVAYDRAAYRMRGSRALLNFPLRIGSEIAAAAAAVAATAPAAGDKRASPEPTASSDSSPSASSATPKRRKRG
EAAAATMAMALVPPPPAAQAPVQLTLPARPWFAAGPVQQLVS
ATGGACAGCATCCGGCATCACCTCC...
ATGGACAGCATCCGGCATCACCTCCTGGACGAGCCGGCGGCGGCGGCGACCGCGAGCGCGGCTCCGCGGCCGGTGTACTGCCGCAGCACGAGCTTCGGCAGCCTAGTGGCGGACCAATGGAGCGAGTCGCTCCCGTTCCGCCCCGACGACGCCGACGACATGGTCGTCTTCGGCGCGCTCCGCGACGCCTTTTCCCAGGGCTGGCTCCCCGACGGCTCCTTCGCCGCCGTGAAGCCCGAGCCCCTGGCGTTCCCGGACTCCCCCTACGAGCGCGGATCCTATCCCTGCCTTGGTGGCTTCCTTCTCGCGGAGGGGCCTGAGACGCCGACCGAGGCGGCGACGACGCCCGGGAGCGAGGAGGAGGCCGCGGCGGCGGTGTCCAGGGGGAAGCACTACCGCGGGGTGAGGCAGCGGCCGTGGGGCAAGTTCGCGGCGGAGATCCGGGACCCGGCCAAGAACGGCGCGCGCGTGTGGCTGGGCACGTACGACAGCGCCGAGGACGCCGCCGTGGCCTACGACCGCGCCGCGTACCGCATGCGCGGCTCCCGCGCGCTCCTCAACTTCCCGCTCCGCATCGGCTCCGAGATCGCCGCGGCGGCCGCCGCCGTCGCGGCCACTGCCCCTGCCGCGGGAGACAAGCGGGCGTCCCCAGAGCCGACCGCGAGCTCCGACTCCTCCCCTTCGGCCTCCTCTGCGACACCGAAGCGGAGGAAGAGAGGCGAGGCCGCTGCCGCGACCATGGCCATGGCCCTTGTGCCGCCCCCGCCGGCGGCGCAGGCGCCCGTCCAGCTGACCCTCCCGGCCCGTCCGTGGTTCGCCGCCGGCCCCGTCCAGCAGCTAGTGAGCTAA
Copyright © 2023 Grassius.org | Last updated: 2023-06-26